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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826490.1_cds_XP_016502675.1_16287
CDS Infomation

[gene=LOC107820841] [db_xref=GeneID:107820841] [protein=UDP-N-acetylmuramoylalanine--D-glutamate ligase-like isoform X5] [protein_id=XP_016502675.1] [location=join(41601..41690,41780..41887,42580..42726,42898..43014,43745..43852,43946..44008,44089..44215,44628..44710,45205..45421,46144..46268,46972..46980)] [gbkey=CDS]
Sequence

ATGAGCTTCAAACTCGCCAAGAATGCTGTCTCACATACAAATATTCAATCTTGCTTTCCT
AAACAAGACCTTAAAGGTCAAACAGTTGCTATAGTTGGTCTTGGAAAATCAGGAACAGCT
GCTACTAAGCTTGCTCTTGCTAGGGGTGCTTCAGTTTTGGCCATTGATCAAAATGAGAAT
TTGAGACCAATCTTTAAGCAAAATGTCTGCTTGGATGAGCATAATGCTGATTTGAAGACA
GTTTTTGGTAATTTTGATAATGAGATTCTGAAAGAGGCAGATATAGTAGTTGTTTCTCCT
GGAGTTCCGCTGGAAAAGTATGGACTTTTCTCCATGTTATGTTCGGGGAAGCAAGTACTC
TCCGAGTTGGATTTTGCTGCGCAAGTTATTCCCAGTTGTACTAAGATTTTAGCTGTGACA
GGAACTAATGGAAAATCTACTGTTGCCACATTTGCAGGACAGATGCTTAACTGTTTGGGT
TTCGAGACATTCGTTGGCGGTAACCTTGGAGTTCCACTTTCAGAAGCTGCTTTTCAGTGC
TTAACTTGGTCTCACCAAAGACCTTTACAGGTTGCTGTTGTGGAGGTCAGTAGTTATCAG
TTAGAAATCCCACCCAAATACTTCTGTCCTTCAGTTGCTGTGATCCTTAATCTTACTCCT
GATCATCTCGAAAGGCACCAAACTATGAGGAACTATGCTGCAACCAAGTGCCGAATTTTT
TCGCACATGAGAGGACAGAAAATTGGTATCCTTCCTCTTGGAAACCAGTATCTTGATGAA
GCAATTATGGATCATGCAAATGGCGTTAATCTTGCTTGGATTGGAGCTCGCCCTGGTGTC
AGTGTTGATGTGGAGGCCAAGATTGCTGACTTAAAGCTTCCTACAATAAGATGTATTTCA
CAACTAAAATTAGGTGAGCTGAAGGCAGTTGGGAATCACAATTACACTAATGCTGCAGTG
GCTGCATTATCAGTTATTGGGTTGGATATTGAGATTGATGCTAACGCTTTAAGTTCAACA
ATTTCCAAATTGCGAACTCTGCCTCATCGAATGCAAGTTGTTCGTGTTGACAACGATGAA
ATAACTTGGGTTGATGACAGCAAGGCAACAAATGTTGAAGCAACATATTCTGGATTGATT
GGCTTTGAACAGAAATCGGTGCTTCTACTTGGTGGTCTTGCAAAGGAGCAATGA

Peptide Sequence

PEP ID

XP_016502675.1
PEP Infomation

PREDICTED: UDP-N-acetylmuramoylalanine--D-glutamate ligase-like isoform X5 [Nicotiana tabacum]
Sequence

MSFKLAKNAVSHTNIQSCFPKQDLKGQTVAIVGLGKSGTAATKLALARGASVLAIDQNEN
LRPIFKQNVCLDEHNADLKTVFGNFDNEILKEADIVVVSPGVPLEKYGLFSMLCSGKQVL
SELDFAAQVIPSCTKILAVTGTNGKSTVATFAGQMLNCLGFETFVGGNLGVPLSEAAFQC
LTWSHQRPLQVAVVEVSSYQLEIPPKYFCPSVAVILNLTPDHLERHQTMRNYAATKCRIF
SHMRGQKIGILPLGNQYLDEAIMDHANGVNLAWIGARPGVSVDVEAKIADLKLPTIRCIS
QLKLGELKAVGNHNYTNAAVAALSVIGLDIEIDANALSSTISKLRTLPHRMQVVRVDNDE
ITWVDDSKATNVEATYSGLIGFEQKSVLLLGGLAKEQ

Transcript Sequence

Gene sequence data has not been registered.